Chanarat lab

Laboratory of Molecular Medical Mycology, Department of Biochemistry, Faculty of Science, Mahidol University

Publications


Unraveling Physical Interactions of Clostridioides difficile with Phage and Phage-Derived Proteins Using In Vitro and Whole-Cell Assays.


Wichuda Phothichaisri, Tanaporn Phetruen, S. Chankhamhaengdecha, T. Janvilisri, P. Ounjai, Robert P Fagan, S. Chanarat

Methods in molecular biology, 2024


Molecular and cellular characterization of four putative nucleotide transporters from the shrimp microsporidian Enterocytozoon hepatopenaei (EHP)


Orawan Thepmanee, N. Munkongwongsiri, Anuphap Prachumwat, V. Saksmerprome, S. Jitrakorn, K. Sritunyalucksana, R. Vanichviriyakit, S. Chanarat, Pattana Jaroenlak, O. Itsathitphaisarn

Scientific Reports, 2023


A multiplexed Cas13-based assay with point-of-care attributes for simultaneous COVID-19 diagnosis and variant surveillance


M. Patchsung, A. Homchan, K. Aphicho, S. Suraritdechachai, T. Wanitchanon, A. Pattama, K. Sappakhaw, P. Meesawat, T. Wongsatit, A. Athipanyasilp, K. Jantarug, N. Athipanyasilp, J. Buahom, S. Visanpattanasin, N. Niljianskul, P. Chaiyen, R. Tinikul, N. Wichukchinda, S. Mahasirimongkol, R. Sirijatuphat, N. Angkasekwinai, M. Crone, P. Freemont, J. Joung, A. Ladha, O. Abudayyeh, J. Gootenberg, F. Zhang, C. Chewapreecha, S. Chanarat, N. Horthongkham, D. Pakotiprapha, C. Uttamapinant

medRxiv, 2022


Insights into the mechanism of pre-mRNA splicing of tiny introns from the genome of a giant ciliate Stentor coeruleus


Nuadthaisong J., Phetruen T., Techawisutthinan C., S. Chanarat

International journal of molecular sciences, 2022


Receptor binding protein of prophage reversibly recognizes the low-molecular weight subunit of the surface-layer protein SlpA in Clostridioides difficile


Tanaporn Phetruen, Sittinan Chanarat, Tavan Janvilisri, Matthew Phanchana, Sitthivut Charoensutthivarakul, Wichuda Phothichaisri, Surang Chankhamhaengdecha

Frontiers in Microbiology, vol. 13, 2022


Potential Role of the Host-Derived Cell-Wall Binding Domain of Endolysin CD16/50L as a Molecular Anchor in Preservation of Uninfected Clostridioides difficile for New Rounds of Phage Infection


Wichuda Phothichaisri, S. Chankhamhaengdecha, T. Janvilisri, Jirayu Nuadthaisong, Tanaporn Phetruen, Robert P. Fagan, S. Chanarat

Microbiology spectrum, 2022


Clinical validation of a Cas13-based assay for the detection of SARS-CoV-2 RNA


M. Patchsung, K. Jantarug, A. Pattama, K. Aphicho, S. Suraritdechachai, P. Meesawat, K. Sappakhaw, Nattawat Leelahakorn, Theerawat Ruenkam, T. Wongsatit, N. Athipanyasilp, Bhumrapee Eiamthong, Benya Lakkanasirorat, Thitima Phoodokmai, N. Niljianskul, D. Pakotiprapha, S. Chanarat, A. Homchan, R. Tinikul, Philaiwarong Kamutira, Kochakorn Phiwkaow, Sahachat Soithongcharoen, Chadaporn Kantiwiriyawanitch, Vinutsada Pongsupasa, Duangthip Trisrivirat, J. Jaroensuk, Thanyaporn Wongnate, S. Maenpuen, P. Chaiyen, Sirichai Kamnerdnakta, J. Swangsri, S. Chuthapisith, Y. Sirivatanauksorn, Chutikarn Chaimayo, R. Sutthent, W. Kantakamalakul, J. Joung, A. Ladha, Xin Jin, J. Gootenberg, O. Abudayyeh, Feng Zhang, N. Horthongkham, C. Uttamapinant

Nature Biomedical Engineering, 2020


Ambient pH regulates secretion of lipases in Malassezia furfur.


Weerapong Juntachai, Athipat Chaichompoo, S. Chanarat

Microbiology, 2019


Emerging Roles of Ubiquitin-like Proteins in Pre-mRNA Splicing.


S. Chanarat, S. Mishra

Trends in biochemical sciences, 2018


Error-Prone Splicing Controlled by the Ubiquitin Relative Hub1.


Ramazan Karaduman, S. Chanarat, B. Pfander, S. Jentsch

Molecular cell, 2017


Splicing and beyond: the many faces of the Prp19 complex.


S. Chanarat, K. Sträßer

Biochimica et biophysica acta, 2013


Prp19C and TREX: Interacting to promote transcription elongation 
and mRNA export


S. Chanarat, C. Burkert-Kautzsch, D. Meinel, K. Sträßer

Transcription, 2012


The Transcription Elongation Factor Bur1-Bur2 Interacts with Replication Protein A and Maintains Genome Stability during Replication Stress*


Emanuel Clausing, A. Mayer, S. Chanarat, B. Müller, S. M. Germann, P. Cramer, M. Lisby, K. Sträßer

The Journal of Biological Chemistry, 2010


Transgenic overexpression of the alpha-synuclein interacting protein synphilin-1 leads to behavioral and neuropathological alterations in mice


S. Nuber, T. Franck, H. Wolburg, U. Schumann, N. Casadei, Kristina Fischer, C. Calaminus, B. Pichler, S. Chanarat, P. Teismann, J. Schulz, A. Luft, J. Tomiuk, J. Wilbertz, A. Bornemann, R. Krüger, O. Riess

neurogenetics, 2010


Overexpression of human wildtype torsinA and human ΔGAG torsinA in a transgenic mouse model causes phenotypic abnormalities


K. Grundmann, B. Reischmann, G. Vanhoutte, J. Hübener, P. Teismann, T. K. Hauser, M. Bonin, J. Wilbertz, S. Horn, H. Nguyen, M. Kuhn, S. Chanarat, H. Wolburg, A. Linden, O. Riess

Neurobiology of Disease, 2007


Hepatitis delta antigen binds to the clamp of RNA polymerase II and affects transcriptional fidelity


Y. Yamaguchi, Takashi Mura, S. Chanarat, Sachiko Okamoto, H. Handa

Genes to cells : devoted to molecular & cellular mechanisms, 2007


Human Transcription Elongation Factor NELF: Identification of Novel Subunits and Reconstitution of the Functionally Active Complex


T. Narita, Y. Yamaguchi, K. Yano, S. Sugimoto, S. Chanarat, T. Wada, Dong-ki Kim, J. Hasegawa, Masashi Omori, N. Inukai, M. Endoh, Tomoko Yamada, H. Handa

Molecular and Cellular Biology, 2003

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